Chirag Patel, PhD

Chirag Patel, PhD

Associate Professor of Biomedical Informatics

10 Shattuck Street, Boston, MA 02115

Chirag Patel's Group

Chirag Patel's long-term research goal is to address problems in human health and disease by developing computational and bioinformatics methods to reproducibly and efficiently reason over high-throughput data streams spanning molecules to populations. Patel's group aims to dissect inter-individual differences in human phenomes through strategies that integrate data sources that capture the comprehensive clinical experience (e.g., through the electronic medical record), the complex phenomena of environmental exposure (e.g., high-throughput measures of the exposome), and inherited genomic variation. He received his doctorate in biomedical informatics from Stanford University.


DBMI Research Areas
DBMI Courses
Career Opportunities

Postdoctoral Fellows: Single Cell Transcriptomics/Aging

Systematically assessing microbiome-disease associations identifies drivers of inconsistency in metagenomic research.
Authors: Tierney BT, Tan Y, Yang Z, Shui B, Walker MJ, Kent BM, Kostic AD, Patel CJ.
PLoS Biol
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Consistency of covid-19 trial preprints with published reports and impact for decision making: retrospective review.
Authors: Zeraatkar D, Pitre T, Leung G, Cusano E, Agarwal A, Khalid F, Escamilla Z, Cooper MA, Ghadimi M, Wang Y, Verdugo-Paiva F, Rada G, Kum E, Qasim A, Bartoszko JJ, Siemieniuk RAC, Patel C, Guyatt G, Brignardello-Petersen R.
BMJ Med
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Identification of occupations susceptible to high exposure and risk associated with multiple toxicants in an observational study: National Health and Nutrition Examination Survey 1999-2014.
Authors: Nguyen VK, Colacino J, Patel CJ, Sartor M, Jolliet O.
Exposome
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Integrated molecular response of exposure to traffic-related pollutants in the US trucking industry.
Authors: Walker DI, Hart JE, Patel CJ, Rudel R, Chu JH, Garshick E, Pennell KD, Laden F, Jones DP.
Environ Int
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The demographic and socioeconomic correlates of behavior and HIV infection status across sub-Saharan Africa.
Authors: Patel CJ, Claypool KT, Chow E, Chung MK, Mai D, Chen J, Bendavid E.
Commun Med (Lond)
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Standardized practices for RNA diagnostics using clinically accessible specimens reclassifies 75% of putative splicing variants.
Authors: Bournazos AM, Riley LG, Bommireddipalli S, Ades L, Akesson LS, Al-Shinnag M, Alexander SI, Archibald AD, Balasubramaniam S, Berman Y, Beshay V, Boggs K, Bojadzieva J, Brown NJ, Bryen SJ, Buckley MF, Chong B, Davis MR, Dawes R, Delatycki M, Donaldson L, Downie L, Edwards C, Edwards M, Engel A, Ewans LJ, Faiz F, Fennell A, Field M, Freckmann ML, Gallacher L, Gear R, Goel H, Goh S, Goodwin L, Hanna B, Harraway J, Higgins M, Ho G, Hopper BK, Horton AE, Hunter MF, Huq AJ, Josephi-Taylor S, Joshi H, Kirk E, Krzesinski E, Kumar KR, Lemckert F, Leventer RJ, Lindsey-Temple SE, Lunke S, Ma A, Macaskill S, Mallawaarachchi A, Marty M, Marum JE, McCarthy HJ, Menezes MP, McLean A, Milnes D, Mohammad S, Mowat D, Niaz A, Palmer EE, Patel C, Patel SG, Phelan D, Pinner JR, Rajagopalan S, Regan M, Rodgers J, Rodrigues M, Roxburgh RH, Sachdev R, Roscioli T, Samarasekera R, Sandaradura SA, Savva E, Schindler T, Shah M, Sinnerbrink IB, Smith JM, Smith RJ, Springer A, Stark Z, Strom SP, Sue CM, Tan K, Tan TY, Tantsis E, Tchan MC, Thompson BA, Trainer AH, van Spaendonck-Zwarts K, Walsh R, Warwick L, White S, White SM, Williams MG, Wilson MJ, Wong WK, Wright DC, Yap P, Yeung A, Young H, Jones KJ, Bennetts B, Cooper ST.
Genet Med
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Development and validation pathways of artificial intelligence tools evaluated in randomised clinical trials.
Authors: Siontis GCM, Sweda R, Noseworthy PA, Friedman PA, Siontis KC, Patel CJ.
BMJ Health Care Inform
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Using Cartesian Doubt To Build a Sequencing-Based View of Microbiology.
Authors: Tierney BT, Szymanski E, Henriksen JR, Kostic AD, Patel CJ.
mSystems
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Adherence to oral oncolytics filled through an internal health-system specialty pharmacy compared with external specialty pharmacies.
Authors: Academia EC, Mejías-De Jesús CM, Stevens JS, Jia LY, Yankama T, Patel C, Lee J.
J Manag Care Spec Pharm
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Characterising the relationships between physiological indicators and all-cause mortality (NHANES): a population-based cohort study.
Authors: Nguyen VK, Colacino J, Chung MK, Goallec AL, Jolliet O, Patel CJ.
Lancet Healthy Longev
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