Chirag Patel, PhD

Chirag Patel, PhD

Associate Professor of Biomedical Informatics

10 Shattuck Street, Boston, MA 02115

Chirag Patel's Group

Chirag Patel's long-term research goal is to address problems in human health and disease by developing computational and bioinformatics methods to reproducibly and efficiently reason over high-throughput data streams spanning molecules to populations. Patel's group aims to dissect inter-individual differences in human phenomes through strategies that integrate data sources that capture the comprehensive clinical experience (e.g., through the electronic medical record), the complex phenomena of environmental exposure (e.g., high-throughput measures of the exposome), and inherited genomic variation. He received his doctorate in biomedical informatics from Stanford University.


DBMI Research Areas
DBMI Courses
Career Opportunities

Postdoctoral Fellows: Single Cell Transcriptomics/Aging

Panel stacking is a threat to consensus statement validity.
Authors: Kepp KP, Aavitsland P, Ballin M, Balloux F, Baral S, Bardosh K, Bauchner H, Bendavid E, Bhopal R, Blumstein DT, Boffetta P, Bourgeois F, Brufsky A, Collignon PJ, Cripps S, Cristea IA, Curtis N, Djulbegovic B, Faude O, Flacco ME, Guyatt GH, Hajishengallis G, Hemkens LG, Hoffmann T, Joffe AR, Klassen TP, Koletsi D, Kontoyiannis DP, Kuhl E, La Vecchia C, Lallukka T, Lambris J, Levitt M, Makridakis S, Maltezou HC, Manzoli L, Marusic A, Mavragani C, Moher D, Mol BW, Muka T, Naudet F, Noble PW, Nordström A, Nordström P, Pandis N, Papatheodorou S, Patel CJ, Petersen I, Pilz S, Plesnila N, Ponsonby AL, Rivas MA, Saltelli A, Schabus M, Schippers MC, Schünemann H, Solmi M, Stang A, Streeck H, Sturmberg JP, Thabane L, Thombs BD, Tsakris A, Wood SN, Ioannidis JPA.
J Clin Epidemiol
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PYPE: A pipeline for phenome-wide association and Mendelian randomization in investigator-driven biobank scale analysis.
Authors: Dalal T, Patel CJ.
Patterns (N Y)
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Epidemic outcomes following government responses to COVID-19: Insights from nearly 100,000 models.
Authors: Bendavid E, Patel CJ.
Sci Adv
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Specification curve analysis to identify heterogeneity in risk factors for dementia: findings from the UK Biobank.
Authors: Luo R, Zeraatkar D, Glymour M, Ellis RJ, Estiri H, Patel CJ.
BMC Med
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VISH-Pred: an ensemble of fine-tuned ESM models for protein toxicity prediction.
Authors: Mall R, Singh A, Patel CN, Guirimand G, Castiglione F.
Brief Bioinform
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Implications of Race Adjustment in Lung-Function Equations.
Authors: Diao JA, He Y, Khazanchi R, Nguemeni Tiako MJ, Witonsky JI, Pierson E, Rajpurkar P, Elhawary JR, Melas-Kyriazi L, Yen A, Martin AR, Levy S, Patel CJ, Farhat M, Borrell LN, Cho MH, Silverman EK, Burchard EG, Manrai AK.
N Engl J Med
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Advanced cardiac imaging, machine learning, and heart age for cardiovascular risk stratification.
Authors: Siontis GC, Patel CJ.
Int J Cardiovasc Imaging
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Arterial Spin-Labeling and DSC Perfusion Metrics Improve Agreement in Neuroradiologists' Clinical Interpretations of Posttreatment High-Grade Glioma Surveillance MR Imaging-An Institutional Experience.
Authors: Yamin G, Tranvinh E, Lanzman BA, Tong E, Hashmi SS, Patel CB, Iv M.
AJNR Am J Neuroradiol
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Heterogeneity in elevated glucose and A1C as predictors of the prediabetes to diabetes transition: Framingham Heart Study, Multi-Ethnic Study on Atherosclerosis, Jackson Heart Study, and Atherosclerosis Risk In Communities.
Authors: Patel CJ, Ioannidis JP, Gregg EW, Vasan RS, Manrai AK.
medRxiv
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Grilling the data: application of specification curve analysis to red meat and all-cause mortality.
Authors: Wang Y, Pitre T, Wallach JD, de Souza RJ, Jassal T, Bier D, Patel CJ, Zeraatkar D.
J Clin Epidemiol
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