Nathan Patrick Palmer, Ph.D.

Nathan Palmer, PhD

Director, Core for Computational Biomedicine
Senior Research Scientist in Biomedical Informatics

Nathan Palmer received a PhD in computer science from the Massachusetts Institute of Technology, studying machine learning, protein folding, and functional genomics. He then held a postdoctoral research position in the lab of Isaac Kohane at Harvard Medical School, during which his research interests expanded to include large-scale genomics, epidemiology, and medical informatics. He then went on to direct the Healthcare Data Science Program in the Department of Biomedical Informatics at Harvard Medical School.

In his current role as Director of the Core for Computational Biomedicine, Dr. Palmer is part of a team of leading-edge technologists who evaluate and deploy modern data analytic processing and storage platforms to meet the needs of emergent research programs, with the goal of improving research reproducibility, scale, and efficiency. This team provides access to data resources comprising tens of billions of medical facts from tens of millions of patients to the research community at HMS, and develops both the technical and methodological solutions to perform novel analytics at scale.

Dr. Palmer continues to work in the area of functional genomics and epidemiology through collaborations with the various Harvard teaching hospitals.

International Changes in COVID-19 Clinical Trajectories Across 315 Hospitals and 6 Countries: Retrospective Cohort Study.
Authors: Weber GM, Zhang HG, L'Yi S, Bonzel CL, Hong C, Avillach P, Gutiérrez-Sacristán A, Palmer NP, Tan ALM, Wang X, Yuan W, Gehlenborg N, Alloni A, Amendola DF, Bellasi A, Bellazzi R, Beraghi M, Bucalo M, Chiovato L, Cho K, Dagliati A, Estiri H, Follett RW, García Barrio N, Hanauer DA, Henderson DW, Ho YL, Holmes JH, Hutch MR, Kavuluru R, Kirchoff K, Klann JG, Krishnamurthy AK, Le TT, Liu M, Loh NHW, Lozano-Zahonero S, Luo Y, Maidlow S, Makoudjou A, Malovini A, Martins MR, Moal B, Morris M, Mowery DL, Murphy SN, Neuraz A, Ngiam KY, Okoshi MP, Omenn GS, Patel LP, Pedrera Jiménez M, Prudente RA, Samayamuthu MJ, Sanz Vidorreta FJ, Schriver ER, Schubert P, Serrano Balazote P, Tan BW, Tanni SE, Tibollo V, Visweswaran S, Wagholikar KB, Xia Z, Zöller D, Kohane IS, Cai T, South AM, Brat GA.
J Med Internet Res
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ATLAS: an automated association test using probabilistically linked health records with application to genetic studies.
Authors: Zhang HG, Hejblum BP, Weber GM, Palmer NP, Churchill SE, Szolovits P, Murphy SN, Liao KP, Kohane IS, Cai T.
J Am Med Inform Assoc
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Real-world data analyses unveiled the immune-related adverse effects of immune checkpoint inhibitors across cancer types.
Authors: Wang F, Yang S, Palmer N, Fox K, Kohane IS, Liao KP, Yu KH, Kou SC.
NPJ Precis Oncol
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Fecal microbiota transplantation and Clostridioides difficile infection among privately insured patients in the United States.
Authors: El Halabi J, Palmer N, Fox K, Kohane I, Farhat MR.
J Gastroenterol
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Factors Associated With Corticosteroid Treatment for Pediatric Acute Respiratory Tract Infections.
Authors: Shapiro DJ, Palmer NP, Bourgeois FT.
J Pediatric Infect Dis Soc
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Multi-PheWAS intersection approach to identify sex differences across comorbidities in 59 140 pediatric patients with autism spectrum disorder.
Authors: Gutiérrez-Sacristán A, Sáez C, De Niz C, Jalali N, DeSain TN, Kumar R, Zachariasse JM, Fox KP, Palmer N, Kohane I, Avillach P.
J Am Med Inform Assoc
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Measuring health-care delays among privately insured patients with tuberculosis in the USA: an observational cohort study.
Authors: El Halabi J, Palmer N, McDuffie M, Golub JJ, Fox K, Kohane I, Farhat MR.
Lancet Infect Dis
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Finding commonalities in rare diseases through the undiagnosed diseases network.
Authors: Yates J, Gutiérrez-Sacristán A, Jouhet V, LeBlanc K, Esteves C, DeSain TN, Benik N, Stedman J, Palmer N, Mellon G, Kohane I, Avillach P.
J Am Med Inform Assoc
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Association between maternal periodontal disease and adverse pregnancy outcomes: an analysis of claims data.
Authors: Choi SE, Choudhary A, Ahern JM, Palmer N, Barrow JR.
Fam Pract
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Emergency department visits for dental problems among adults with private dental insurance: A national observational study.
Authors: Amen TB, Kim I, Peters G, Gutiérrez-Sacristán A, Palmer N, Simon L.
Am J Emerg Med
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