Shawn Norman Murphy, M.D., Ph.D.

Shawn Murphy, MD, PhD

Professor of Neurology at MGH
Associate Professor of Biomedical Informatics, Harvard Medical School (Secondary)

6177247980

Shawn Murphy currently serves as the Director of Research Computing and Informatics at Partners Healthcare and Associate Director for the Laboratory of Computer Science at the Massachusetts General Hospital where he developed the Research Patient Data Registry (RPDR) for Partners Healthcare. This application, which serves over 5,000 investigators performing research using the hospital medical record, served as the test bed for his work with Zak Kohane in developing the open source Informatics for Integrating Biology and the Bedside (i2b2) software platform now operating at over 120 hospitals worldwide. Murphy’s contribution as chief architect of the i2b2 platform has served to strengthen the understanding of the metabolic and genetic underpinnings of complex diseases by developing an informatics framework to integrate data for clinical research from electronic health records.

Integrating outside modules into the i2b2 architecture.
Authors: Mendis M, Phillips LC, Kuttan R, Pan W, Gainer V, Kohane I, Murphy SN.
AMIA Annu Symp Proc
View full abstract on Pubmed
STROBE-based methodology for detection of adverse events across multiple communities.
Authors: Sordo M, Colecchi J, Dubey A, Dubey AK, Gainer V, Murphy SN.
AMIA Annu Symp Proc
View full abstract on Pubmed
Simulated yields of prospective specimen collection from specific patient cohorts using retrospective data from a research patient data repository.
Authors: Dubey AK, Gainer V, Murphy SN.
AMIA Annu Symp Proc
View full abstract on Pubmed
A study of the age attribute in a query tool for a clinical data warehouse.
Authors: Scheufele EL, Scheufele EL, Dubey A, Dubey AK, Murphy SN.
AMIA Annu Symp Proc
View full abstract on Pubmed
iTools: a framework for classification, categorization and integration of computational biology resources.
Authors: Dinov ID, Rubin D, Lorensen W, Dugan J, Ma J, Murphy S, Kirschner B, Bug W, Sherman M, Floratos A, Kennedy D, Jagadish HV, Schmidt J, Athey B, Califano A, Musen M, Altman R, Kikinis R, Kohane I, Delp S, Parker DS, Toga AW.
PLoS One
View full abstract on Pubmed
Aligning temporal data by sentinel events: discovering patterns in electronic health records
Authors: Wang, T., Plaisant, C., Quinn, A., Stanchak, R., Murphy, S.N., Shneiderman, B
ACM Computer-Human Interaction
Mining for associations between categorical data items in a clinical data repository.
Authors: Dubey AK, Herrick C, Murphy SN.
AMIA Annu Symp Proc
View full abstract on Pubmed
Using the i2b2 hive for clinical discovery: an example.
Authors: Gainer V, Hackett K, Mendis M, Kuttan R, Pan W, Phillips LC, Chueh HC, Murphy S.
AMIA Annu Symp Proc
View full abstract on Pubmed
Architecture of the open-source clinical research chart from Informatics for Integrating Biology and the Bedside.
Authors: Murphy SN, Mendis M, Hackett K, Kuttan R, Pan W, Phillips LC, Gainer V, Berkowicz D, Glaser JP, Kohane I, Chueh HC.
AMIA Annu Symp Proc
View full abstract on Pubmed
Integration of Hive and cell software in the i2b2 architecture.
Authors: Mendis M, Wattanasin N, Kuttan R, Pan W, Philips L, Hackett K, Gainer V, Chueh HC, Murphy S.
AMIA Annu Symp Proc
View full abstract on Pubmed